Elements Interface for external analysis packages

DataJoint Element for interoperability with other software. DataJoint Elements collectively standardize and automate data collection and analysis for neuroscience experiments. Typical Elements are modular pipelines for data storage and processing with corresponding database tables that can be combined with other Elements to assemble a fully functional pipeline. Element Interface is home to a number of utilities that make this possible.

Element Interface provides a number of loaders and utility functions used across a number of other Elements.

• Calcium imaging loaders: Suite2p, CaImAn, PrairieView

• File management, see find_full_path API

• Data ingestion, see ingest_csv_to_table API

Visit the Concepts page for more information on these tools.